Research Interests
- Computational Linguistics (parsing, language modeling)
- Bayesian Learning (MCMC)
- Music Information Retrieval
- Bioinformatics
Journals
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A haplotype inference method based on sparsely connected multi-body Ising model [link]
Masashi Kato, Qian Ji Gao, Hiroshi Chigira, Hiroyuki Shindo, Masato Inoue
Journal of Physics: Conference Series, 233, 012022, 2010
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Grouping preprocess for haplotype inference from SNP and CNV data [link]
Hiroyuki Shindo, Hiroshi Chigira, Tomoyo Nagaoka, Naoyuki Kamatani, Masato Inoue
Journal of Physics: Conference Series, 197, 012009, 2009
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Grouping preprocess to accurately extend application of EM algorithm to haplotype inference [link]
Hiroyuki Shindo, Hiroshi Chigira, Junji Tanaka, Naoyuki Kamatani, Masato Inoue
Journal of Human Genetics, 53(8), 747-756, 2008
Conferences, Workshops
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Bayesian Symbol-Refined Tree Substitution Grammars for Syntactic Parsing [pdf] [slides] [bibtex]
Hiroyuki Shindo, Yusuke Miyao, Akinori Fujino and Masaaki Nagata
In Proceedings of ACL, 2012 (acceptance rate: 19%)
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Insertion Operator for Baysian Tree Substitution Grammars [pdf] [slides] [bibtex]
Hiroyuki Shindo, Akinori Fujino and Masaaki Nagata
In Proceedings of ACL, 2011 (acceptance rate: 26%)
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Word Alignment with Synonym Regularization [pdf] [poster] [bibtex]
Hiroyuki Shindo, Akinori Fujino and Masaaki Nagata.
In Proceedings of ACL, 2010 (acceptance rate: 21%)
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A haplotype inference method based on sparsely connected multi-body Ising model
Masashi Kato, Qian Ji Gao, Hiroshi Chigira, Hiroyuki Shindo, Masato Inoue
International Workshop on Statistical-Mechanical Informatics 2010 (IW-SMI2010), 2010
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Grouping preprocess for haplotype inference from SNP and CNV data
Hiroyuki Shindo, Hiroshi Chigira, Tomoyo Nagaoka, Naoyuki Kamatani, Masato Inoue
International Workshop on Statistical-Mechanical Informatics 2009 (IW-SMI2009), 2009
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Haplotype inference from SNP and CNV data assuming Hardy-Weinberg equilibrium
Hiroyuki Shindo, Hiroshi Chigira, Tomoyo Nagaoka, Naoyuki Kamatani, Masato Inoue
The 1st International Symposium on Biomedical Science and Engineering, 2009
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Dimension reduction using symmetrical structure --an example of the expectation-maximization (EM) algorithm for haplotype inference
Hiroyuki Shindo, Hiroshi Chigira, Junji Tanaka, Naoyuki Kamatani, Masato Inoue
Disordered systems group seminar at King's College London (invited seminar), 2008
